Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNALVAHNSKAWDKKVETGNEWTVAVEQQVIEQAKKGNWDIRVTPMKDVPKDWFPPIKGLKVLCLASGGGQQGPVLAAAGADVTVLDNSEKQLNQDRMIAERDGLTIHTVKGSMDDLSVFNDESFDVIVHPVANVFVENVLPVWKEAYRVLKRNGILISGFVNPVVFLFDTELEQQGVLKVKHSIPYADPEDLPKHKVKKLIENNEALEFGHSLEDQIKGQIDAGFIVTGFYEDKGGFVLDQYIHTYSATRSVKV |
3E8S Chain:A ((8-227)) | --NPEDALLDSWHQNAQA---WIDAVRHGAIESRRQVTD-------QAILLAILG-RQPERVLDLGCGEGWLLRALADRGIEAVGVDGDRTLVDAARAAGAGEVHLASYAQLAEAKV-P-VGKDYDLICANFALLH-QDIIELLSAMRTLLVPGGALVIQTLHPWSVADGDY-------QDGWREE--SFAGF-------AGDWQPMPWYFRTLASWLNALDMAGLRLVSLQEPQHPQ---SAVPQSLLMVAERH |
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General information:
TITO was launched using:
| RESULT:
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Template: 3E8S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -33870 for 1819 contacts (-18.6/contact) +
2D Compatibility (PS) -22844 + (NN) 1089 + (LL) 2272
1D Compatibility (HY) 0 + (ID) 1350
Total energy: -54703.0 ( -30.07 by residue)
QMean score : 0.265
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