Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence--------------------------------------MNTSI-----------EQKPFNRSVIVGILLAGAFVAILNQTLLITALPHIMRDFNV----------------------DANQAQWLTTSFMLTNGILIPITAFLIEKFTSRALLITAMSIFTAGTVVGAFAPNFPVLLTARIIQAAGAGIMMPLMQTVFLTIFPIEKRGQAMGMVGLVISFAP----AIGPTLSGWAVEAFSW-----------------RSLFYIILPFAVIDLILASILMKNVTTLRKTQID------ILSVILSTFGFGGLLYGFSSVGSYGWSSSTVLISLLVGV-----------------------------------IALLLFITRQ---------------------------------------------MKLKKPML--------------------------EFRVFTFGVFSLTTLLG-------TLVFALLI------GTETILPLYTQNVRDVTAFDTGLMLLPGAVVMGFMSPIIGRIFDRVGGRGLAIAGFCIIFLTSLPFMQLTDHTSLAWIV--VLYTVRLLG-TAMIMMPVTTAGINAL-PRHLIPHGTAMNNTIRQVGGSIGTALLVSVMSNQAAHAGT-----------TNVKHAALHGMNAAFIVAAVIALVGFLLSFTL-KKPQRPAEQQPAR-----------
4OK4 Chain:A ((30-733))HPNLIVTEQDVANIAASWESYDAYAEQLNADKTNLDAFMAEGVVVPMPKDAGGGYTHEQHKRNYKAIRNAGFLYQVTGDEKYLTFAKDLLLAYAKMYPSLGEHPNRKEQSPGRLFWQSLNEAVWLVYSIQGYDAIIDGLAAEEKQEIESGVFLPMAKFLSVES---PETFNKIHNLGTWAVAAVGMTGYVLGNDELVEISLMGLDKTGKAGFMKQLDKLFSPDGYYTEGPYYQRYALMPFIWFAKAIETNEPERKIFEYRNNILLKAVYTTIDLSYAGYFFPINDALKDKGIDTVELVHALAIVYSITGDNTLLDIAQEQGRISLTGDGLKVAKAVGEGLTQPYNYRSILLGDGADGDQGALSIHRLGEGHNHMALVAKNTSQGMGHGHFDKLNWLLYDNGNEIVTDYGAARYLNVEAKYGGHYLAENNTWAKQTIAHNTLVVNEQSHFYGDVTTADLHHPEVLSFYSGEDYQLSSAKEANAYDGVEFVRSMLLVNVPSLEHPIVVDVLNVSADKASTFDLPLYFNGQIIDFSFKVKDNKNVMKMLGKRN----GYQHLWLRNTAPVG-DASERATWILDDRFYSYAFVTSTPSKKQNVLIAELGANDPNYNLRQQQVL---IRRVEK-AKQASFVSVLEPHGKYDGSLETTSGAYSNVKSVKHVSENGKDVVVVDLKDGSNVVVALSYNANSEQVHKVNAGEEAIEWKGFSSVVV


General information:
TITO was launched using:
RESULT:

Template: 4OK4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2139 -314949 -147.24 -684.67
target 2D structure prediction score : 0.37
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -147.24
2D Compatibility (Sec. Struct. Predict.) : 0.37
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.241

(partial model without unconserved sides chains):
PDB file : Tito_4OK4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4OK4-query.scw
PDB file : Tito_Scwrl_4OK4.pdb: