Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-------------------------MMKKLFHSTLIVLLFFSFFGVQPIHAKKQFKVPNSVASISKENTYPNASQDQPMLQPSKLAKELLDHSEVK-------IENPHLIKMLNESNISGTPLAVGYRATIFL-----GKWALGYESNETVANWEYKKINTN------RADNRGGKETAEMHYAQEQQYRVKGGLTAK-----VPNAEDVKSMMM-QKAMKKTNLPLAFETVIGAGTKRDQIYKVAPK---------KIGYLHAYAPAV-----NEKGKVTYGE-----VYLVLK---------GNKRKLVVKNVTSQGIGAWIPVQDHVTF-----GFQLSSLPR-----
3HGU Chain:A ((2-354))KDYSLEIDAVMKAAQINDTNNFVQALMRWHFSKETGSPFWLGMREQLNFDPIKDVKTINDLRQFS-DISHCLRQEPVANLVPQGLPADSHPQVYESGGAPKYVVAYDAWIEALISWRMSGYQHRPGRPSGNTLAAIPTGPHIVGAINKERALRLGGMFFSIDIDPRWVKRSLSEGDTATVRKYTHHLVDQVQNTLMNQDIRFLVTTPPVLRELLKRPEVVLQMKQSLAQITLGGTELNLDEIKFIASEILPDCEFSASYGSTSALGVSRSLLITSESQQVIYDSFSPFITYDVVDSITAQTVEYGERGNVIVTHLSPWAFYPRVAERDTAIRLPGVSGFAGDRLADIEPLK


General information:
TITO was launched using:
RESULT:

Template: 3HGU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1092 -69082 -63.26 -262.67
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : -63.26
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.220

(partial model without unconserved sides chains):
PDB file : Tito_3HGU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3HGU-query.scw
PDB file : Tito_Scwrl_3HGU.pdb: