Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGIAGTFIFMIVIGAAIGAVTNHLAIQMLFRPYKAYYLFGKRVPFTPGLIPRRRDELAKQMGLMVVNHLLTPEGIKKRLVSDAAKTQALRVGEQLIQKLSLSEVTVKEALEKAGMKRPEKAADAWISSWTDDKLHELFRQYGDQSLKELVPIEVQEKLEEKIPMISGYILSRSVRYFESDEGKIRLGNMIDDFLKERGMLGSMVQLFLGNSSLADRVLPELLKFLRNEETNKLLSDLLKNEWGKLREYTFNEADEKWNAKALIFSLKRRVLQAFS---TAPFFNNTIGTLTVRYESELTQQMLPALLDKLLEGISSNLESVLKRLRLEEIVKEQVDQFPVERLEEMVLSISKKEFKMITYLGGLLGGIIGAIQALFVILF
4DO7 Chain:A ((3-289))--------------------ALRIDSHQHFWRYR-----AADYPW----IGAGMGVLARDYLPDALHPLMHAQALG---ASIAVQARAGRDETAFLLELACDEARIAAVVGWEDLRAPQ--LAERVAEWRGTKLRGFRHQLQDEA-------DVRAFVDD-------ADFARGVAWLQAN-------DYVYDVL------------------VFERQLPDVQAFCARHDAHWLVLDHA----GKPALAEFDTALARWRAALRELAALPHVVCKLSGLVTEADWRRGLRASDLRHIEQCLDAALDAFGPQRLMFGSDWPVCLLAA-SYDEVASL-VERWAESRL-------SAAERSAL------WGGTAARCYALP----


General information:
TITO was launched using:
RESULT:

Template: 4DO7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1515 -130972 -86.45 -466.09
target 2D structure prediction score : 0.39
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -86.45
2D Compatibility (Sec. Struct. Predict.) : 0.39
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.219

(partial model without unconserved sides chains):
PDB file : Tito_4DO7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4DO7-query.scw
PDB file : Tito_Scwrl_4DO7.pdb: