Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMARKKKKKHEDEHVDESWLVPYADILTLLLALFIVLYASSSIDAAKFQMLSKSFNEVFTGGTGVLDYSSVTPPENESDGIDEVKKEKEEKEKNKKEKEKAADQEELENVKSQVEKFIKDKKLEHQLETKMTSEGLLITIKDSIFFDSGKATIRKEDVPLAKEISNLLVINPPRNIIISGHTDNMPIKNSEFQSNWHLSVMRAVNFMGLLIENPKLDAKVFSAKGYGEYKPVASNKTAEGRSKNRRVEVLILPRGAAETNEK
3TD5 Chain:H ((16-119))----------------------------------------------------------------------------------------------------------------------------------------------VFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIEGHTDNTGPR----KLNERLSLARANSVKSALVNEYNVDASRLSTQGFAWDQPIADNKTKEGRAMNRRVFATI-----------


General information:
TITO was launched using:
RESULT:

Template: 3TD5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain H - contact count / total energy / energy per contact / energy per residue : 456 -36289 -79.58 -348.93
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain H : 0.65

3D Compatibility (PKB) : -79.58
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.501

(partial model without unconserved sides chains):
PDB file : Tito_3TD5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3TD5-query.scw
PDB file : Tito_Scwrl_3TD5.pdb: