Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMISLQSDQLLEATVGQFMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDPSYRLHGLIGTNMIMNSIFGLERIEFEKLDQITVEEVMLTDIPRLHINDPIMKGFGMVINNGFVCVENDEQVFEGIFTRRVVLKELNKHIRSLNK
1YAV Chain:A ((11-144))--------LLEATVGQFMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDPSYRLHGLIGTNMIMNSIFGLERIEFEKLDQITVEEVMLTDIPRLHINDPIMKGFGMVINNGFVCVENDEQVFEGIFTRRVVLKELNKHI-----


General information:
TITO was launched using:
RESULT:

Template: 1YAV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 611 -120428 -197.10 -898.72
target 2D structure prediction score : 0.45
Monomeric hydrophicity matching model chain A : 0.96

3D Compatibility (PKB) : -197.10
2D Compatibility (Sec. Struct. Predict.) : 0.45
1D Compatibility (Hydrophobicity) : 0.96
QMean score : 0.526

(partial model without unconserved sides chains):
PDB file : Tito_1YAV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1YAV-query.scw
PDB file : Tito_Scwrl_1YAV.pdb: