Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTNRDIVWHEASITKEEYQQKNKHKSSILWLTGLSGSGKSTIANAAARELF-EQGYQVIVLDGDNIRHGLNRDLGFSDEDRKENIRRIGEVAKLFVQQGTIVITAFISPFREDRQQVRELVEAG-----EFNEVYIKCDLDICEQRDPKGLYKKARNGEIPFFTGIDSPYEEPEAPELVLDSGQHDREACKNQLIEFVKQKLS
3CR7 Chain:D ((6-181))----------------------------IWLTGLSASGKSTLAVELEHQLVRDRRVHAYRLDGDNIRFGLNKDLGFSEADRNENIRRIAEVAKLFADSNSIAITSFISPYRKDRDTARQLHEVAEETGLPFVEVYVDVPVEVAEQRDPKGLYKKAREGVIKEFTGISAPYEAPANPEVHVKNYELPVQDAVKQIIDYLDTK--


General information:
TITO was launched using:
RESULT:

Template: 3CR7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 796 -71343 -89.63 -427.20
target 2D structure prediction score : 0.74
Monomeric hydrophicity matching model chain D : 0.82

3D Compatibility (PKB) : -89.63
2D Compatibility (Sec. Struct. Predict.) : 0.74
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.562

(partial model without unconserved sides chains):
PDB file : Tito_3CR7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3CR7-query.scw
PDB file : Tito_Scwrl_3CR7.pdb: