Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEQKLKAMKNTAQNKTWVSFLNQNHPYTLLHWSIGGAESIKKDVWLLQDEMTFETQEFTTIDLAIEWIRENMDGITDVL--------------
1YD0 Chain:A ((1-89))MKEKIRKKILLAPEEPGVYIFKNKG----VPIYIGKAKRLSNRLRSYLNPQTEKVFRIGEEADELETIVVMNEREAFILEANLIKKYRPKYNV


General information:
TITO was launched using:
RESULT:

Template: 1YD0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 290 -19310 -66.59 -257.47
target 2D structure prediction score : 0.41
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -66.59
2D Compatibility (Sec. Struct. Predict.) : 0.41
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.177

(partial model without unconserved sides chains):
PDB file : Tito_1YD0.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1YD0-query.scw
PDB file : Tito_Scwrl_1YD0.pdb: