Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGKNPVVIGIAGGSGSGKTSVTRSIYEQF-------KGHSILMIQQDLYYKDQSHLPFEERLNT-----NYDHPLAFDNDYLIEHIQDLLNYRPIEKPIYDYKLHTRSEETVHVEPKDVIILEGILVLEDKRLRDLMDIKLYVDTDADLRIIRRIMRDINERGRSIDSVIEQYVSVVRPMHNQFVEPTKRYADIIIPEGGQNHVAIDLMVTKIQTILEQNAIL
2JEO Chain:A ((23-231))----PFLIGVSGGTASGKSTVCEKIMELLGQNEVEQRQRKVVILSQDRFYK---VLTAEQKAKALKGQYNFDHPDAFDNDLMHRTLKNIVEGKTVEVPTYDFVTHSRLPETTVVYPADVVLFEGILVFYSQEIRDMFHLRLFVDTDSDVRLSRRVLRDV-R---DLEQILTQYTTFVKPAFEEFCLPTKKYADVIIPRGVDNMVAINLIVQHIQDIL------


General information:
TITO was launched using:
RESULT:

Template: 2JEO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 887 -10423 -11.75 -53.73
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain A : 0.85

3D Compatibility (PKB) : -11.75
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.85
QMean score : 0.515

(partial model without unconserved sides chains):
PDB file : Tito_2JEO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2JEO-query.scw
PDB file : Tito_Scwrl_2JEO.pdb: