Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVTVREAKLEDIKDIAKVHVDSWRTTYHEIIPIDYLNSLNYKEFEDKWKSRS-------LKGVFVAQDEKGSVFGFASFGPIRSEQEGYDGELYAIYLLEERQRQGAGRALLAKGAEFLLQHGFSSMFVWVIEQN-PSIIFYQAYSPERVAEDNFEI---AGVRLKEVGLGWPDLSALKTLLNR
1GHE Chain:A ((4-173))-AQLRRVTAESFAHYRHGLAQLLFETVHGGASVGFMADLDMQQA-YAWCDGLKADIAAGSLLLWVVAED-DNVLASAQLSLCQKPNGLNRAEVQKLMVLPSARGRGLGRQLMDEVEQVAVKHKRGLLHLDTE-AGSVAEAFYSALAYTRVGELPGYCATPDGRLHPTAIYFKTL----------


General information:
TITO was launched using:
RESULT:

Template: 1GHE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 677 -12026 -17.76 -75.64
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -17.76
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.413

(partial model without unconserved sides chains):
PDB file : Tito_1GHE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1GHE-query.scw
PDB file : Tito_Scwrl_1GHE.pdb: