Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDMKHTLLEALGIEIVENTAERCVAVMPVDHRTVQPFGYLHGGASVALAETAASAGAQNLIDHTTQACVGLEINANHLKSVKEGTVKAIAEPVHIGRTTIVYHIHIYDEQERLICISRCTLAVIKK
4QD9 Chain:E ((18-138))---KNSIGDLLGIRFEAFDDESLTASMPVDSRTHQPFGLLHGGASVVLAESLGSMASYLCVDTSQYYCVGLEVNANHLRGLRSGRVTAVARAIHLGRTTHVWDIRLSGDDGKPSCIARLTMAVV--


General information:
TITO was launched using:
RESULT:

Template: 4QD9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain E - contact count / total energy / energy per contact / energy per residue : 588 -94009 -159.88 -776.93
target 2D structure prediction score : 0.41
Monomeric hydrophicity matching model chain E : 0.83

3D Compatibility (PKB) : -159.88
2D Compatibility (Sec. Struct. Predict.) : 0.41
1D Compatibility (Hydrophobicity) : 0.83
QMean score : 0.543

(partial model without unconserved sides chains):
PDB file : Tito_4QD9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4QD9-query.scw
PDB file : Tito_Scwrl_4QD9.pdb: