Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKLVLIGGGYGNMRVLHRLLPNQLPDDVSITLIDRNPYHCL-KTEYYALAAGTISDHHIRVSFPEH---PRLDVQYG-DITSIDIVQKQVLFQDREPISYDDAIIGLGCEDKYHNVPGAPEFTYSIQTIDQSRETYQKLNNLSANATVAIVGAGLSGVELASELRESRDDLNIILFDRGNLILSSFPERLSKYVQKWFEEHGVRIINRANITKVEEGVVYNHDDPISADAIVWTAGIQPN-KVVRDLDVEKDAQGRIVLTPHHNLPGDEHLYVVGDCASLPH--APSAQLAEAQAEQIVQILQKRWNGEALPESMPQFKLKGVLGSLGKKAGFGLVADRPLIGRVPRMLKSGLLWMYKHHNG
1XHC Chain:A ((9-302))-SKVVIVGNGPGGFELAKQLSQ-----TYEVTVIDKEPVPYYSKPMLSHYIAGFIPRNRLFPYSLDWYRKRGIEIRLAEEAKLIDRGRKVVITEK-GEVPYDTLVLATGARAREPQIKGK-EYLLTLRTIFDADRIKESI---ENSGEAIIIGGGFIGLELAGNLAEAG--YHVKLIHRGAMFL-GLDEELSNMIKDMLEETGVKFFLNSELLEANEEGVLTNSGFIEGKVKICAIGIVPNVDLARRSGIHTG-RG-ILIDDNFR-TSAKDVYAIGDCAEYSGIIAGTAKAAMEQARVLADILKGE---------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1XHC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1565 1393 0.89 4.96
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : 0.89
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.529

(partial model without unconserved sides chains):
PDB file : Tito_1XHC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1XHC-query.scw
PDB file : Tito_Scwrl_1XHC.pdb: