Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMITESRQMLDKRNRPLRDLRISVTDRCNFRCTYCMPAELFGPDYPFLKKEELLSFEELERLATLFVTRFGVEKIRLT-GGEPLMRKDMPELIKKLARIPGIRDIAMTTNGSLLPVYAKRLKEA-GLKRVTISLDSLEDERFKKINGR--GVSVSKVLEGIEAAKQAGLGVKINMVVQKGVNEKDILPMARYFKEKGHILRFIEFMDVGNTNQWEKKDVMTKAEIIDLINKHMPVEPIAPNYIGEVASRFRYLDGSGEIGVISSVSDAFCGSCNRARLSARGELFTCLFASSGFDLRAPVRQELSDDELSEMIGTVWKNRIDQYSVDRTLSKASGKKKVEMSYIGG
2YX0 Chain:A ((142-273))----------------------------------------------------------------------PTHAAISLSGEPMLYPYMGDLVEEFHK-RGF-TTFIVTNGTIPERLEEMIKEDKLPTQLYVSITAPDIETYNSVNIPMIPDGWERILRFLELMRDLPTRTVVRLTLVKGENMHSPEKYAKLILKARPM---------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2YX0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 483 -6814 -14.11 -55.85
target 2D structure prediction score : 0.80
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : -14.11
2D Compatibility (Sec. Struct. Predict.) : 0.80
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.579

(partial model without unconserved sides chains):
PDB file : Tito_2YX0.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2YX0-query.scw
PDB file : Tito_Scwrl_2YX0.pdb: