Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNLTDKTVLITGGASGIGYAAVQAFLNQQANVVVADIDEAQGEAMIRKENNDRLH--FVHTDITDEPACQNAIRSAVDKFGGLDVLINNAGIEIVAP----IHEMELSNWNKVLNVNLTGMFLMSKHALKYMLKSGKGNIINTCSVGGVV--AWPDIPAYNASKGGVLQLTRSMAVDYAKHNIRVNCVCPGIIDTPLNEKSFLENNEGTLEEIKKEKAKVN-PLLRLGKPEEIANVMLFLASDLSSYMTGSAITADGGYTAQ
4WEC Chain:D ((27-272))-RLAGKVAVITGGASGIGLATGRRLRAEGATVVVGDIDPTTGKAA-----ADELEGLFVPVDVSEQEAVDNLFDTAASTFGRVDIAFNNAGIS--PPEDDLIENTDLPAWQRVQDINLKSVYLSCRAALRHMVPAGKGSIINTASFVAVMGSATSQI-SYTASKGGVLAMSRELGVQYARQGIRVNALCPGPVNTPLLQELFAKDPE------RAARRLVHIPLGRFAEPEELAAAVAFLASDDASFITGSTFLVDGGISS-


General information:
TITO was launched using:
RESULT:

Template: 4WEC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 1299 -37331 -28.74 -157.51
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain D : 0.84

3D Compatibility (PKB) : -28.74
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.84
QMean score : 0.446

(partial model without unconserved sides chains):
PDB file : Tito_4WEC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4WEC-query.scw
PDB file : Tito_Scwrl_4WEC.pdb: