Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMREELKGIFASVFGEK-EGLRFFFAPGRVNLIGEHTDYNGGHVFPCALTMGTYAAVAERNDGLVRMYSDNFRNAGIKECSLDDIRYQKEDDWANYPKGVIYEFQQRGYAVPHGFDIVFSGNIPNGAGLSSSASIELLMGVVLQSYFHPEVDALELVKMAQHAENHFIGVNCGIMDQFAIGMGKKHHAMLLNCDTLDYEYSKLNVSGLALVIANTNKKRTLADSSYNTRRQECNDALLDLKKGLDIAALGDIKPSDFDAHSSLIQNETNRRRAKHAVYENHRAIKTAHMFKENNIDEIGQLMKESHLSLKDDYEVTCPELDELVFAAWDHEGVIGSRMTGAGFGGCTISIVKDEFVDDFIQKVGDRYQEKTGLRADFYVADIG-EGARELKGE
4HAC Chain:A ((10-320))--------HSSGLVPRGSHMVSCSAPGKIYLFGEHAVVYGETAIACAVELRTRVRAELNDS--ITIQSQ-IGR-----TGL-------DFEKHPYVSAVIEKMRKSI--PINGVFLTVDSDIPVGSGLGSSAAVTIASIGALNELFGFGLSLQEIAKLGHEIEIKVQGAA-SPTDTYVSTFGGV---VTIPERR------KLKTPDCGIVIGDTGVFSSTKE--LV-------ANVRQLR---------ESYPDLI-------------EPLMTSIGKI--SRIGEQLVLSGDYASIGRLMNVNQGLLDA-LGVNILELSQLIYSARA-AGAFGAKITGAGGGGCMVALTAPEKCNQVAEAVAGA-------GGKVTITKPTEQGLKV----


General information:
TITO was launched using:
RESULT:

Template: 4HAC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1865 -31783 -17.04 -102.86
target 2D structure prediction score : 0.03
Monomeric hydrophicity matching model chain A : 0.71

3D Compatibility (PKB) : -17.04
2D Compatibility (Sec. Struct. Predict.) : 0.03
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.542

(partial model without unconserved sides chains):
PDB file : Tito_4HAC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4HAC-query.scw
PDB file : Tito_Scwrl_4HAC.pdb: