Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSEHQSLPAPEASTEVRVAIVGVGNCASSLVQGVEYYYNADDTSTVPGLMHVRFGPYHVRDVKFVAAFDVDAKKVGFDLSDAIFASENNTIKIADVAPTNVIVQRGPTLDGIGKYYADTIELSDAEPVDVVQALKEAKVDVLVSYLPVGSEEADKFYAQCAIDAGVAFVNALPVFIASDP----VWAKKFT-DARVPIVGDDIKSQVGATITHRVLAKLFEDRGVQLDRTMQLNVGGNMDFLNMLERERLESKKISKTQAVTSNLKREFKTKDVHIGPSDHVGWLDDRKWAYVRLEGRAFGDVPLNLEYKLEVWDSPNSAGVIIDAVRAAKIAKDRGIGGPVIPASAYLMKSPPEQLPDDIARAQLEEFIIG |
1F06 Chain:A ((1-134)) | ------------MTNIRVAIVGYGNLGRSVEKLIAK--Q--------------------PDMDLVGIFSRRATLD----------TK-----------TPVFD-----------------------VADVDKHA--DDVDVLFLCMGSATD--IPEQAPKFAQFACTVDTY-D-NHRDIPRHRQVMNEAATAAGNVALVSTGW--DPGMFSINRVYAAAV-------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1F06.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -78560 for 906 contacts (-86.7/contact) +
2D Compatibility (PS) -13483 + (NN) -1032 + (LL) 14068
1D Compatibility (HY) -4800 + (ID) 1600
Total energy: -85407.0 ( -94.27 by residue)
QMean score : 0.434
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