Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGWVAKIFRVGRVVEPAAPLPAAIAEPPAGVRGSLQIRHVDAGSCNGCEVEISGAFGPVYDAE------RFGARLV--ASPQHADALLVTGVVTHNMAGPLRKTLEATPRPRVVIACGDCALNRGVFADAY---------GVVGAVGEVVPVDVEIAGCPPTPAAIMAALRSVTGK
4OMF Chain:G ((45-186))
--------------------------------AKPRIGYIHLSGCTGDAMSLTENYDILAELLTNMVDIVYGQTLVDLWEMPEMDLALVEGSVCLQDEHSLHELKELREKAKLVCAFGSCAATGCFTRYSRGGQQAQPSHESFVPIADLIDVDLALPGCPPSPEIIAKTVVALL--
General information:
TITO was launched using:
RESULT:
Template:
4OMF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -81556 for 996 contacts (-81.9/contact) +
2D Compatibility (PS) -13337 + (NN) -2307 + (LL) 2296
1D Compatibility (HY) -7600 + (ID) 1300
Total energy: -103804.0 ( -104.22 by residue)
QMean score : 0.326
(partial model without unconserved sides chains):
PDB file :
Tito_4OMF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4OMF-query.scw
PDB file :
Tito_Scwrl_4OMF.pdb
: