Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MTLKVKGEGLGAQVTGVD-PKNLDDITTDEIRDIVYTNKLVVLKDVHPSPREFIKLGRIIGQIVPYYEPMYHHEDHPEIFVSSTEEGQGVPKTGAFWHIDYMFMPEPFAFSMVLPLAVPGHDRGTYFIDLARVWQSLPAAKRDPARGTVSTHDPRRHIKIRPSDVYRPIGEVWDEINRTTPPIKWPTVIRHPKTGQEILYICATGTTKIEDKDGNPVDPEVLQELMAATGQLDPEYQSPFIHTQHYQVGDIILWDNRVLMHRAKHGSAAGTLTTYRLTMLDGLKTPGYAA |
| 1GY9 Chain:A ((4-282)) | RLSITPLGPYIGAQISGADLTRPLSDNQFEQLYHAVLRHQVVFLRDQAITPQQQRALAQRFGEL-HIHPVYPHAEGVDEIIVLDTHNDN--PPDNDNWHTDVTFIETPPAGAILAAKELPSTGGDTLWTSGIAAYEALSVPFRQLLSGLRAEHDFRKSFPEYKYRKTEEEHQRWREAVAKNPPLLHPVVRTHPVSGKQALFVNEGFTTRIVDVS-EKESEALLSFLFAHITK------PEFQVRWRWQPNDIAIWDNRVTQHYANADYLPQRRIMHRATILG--DKPFYRA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GY9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -127108 for 2304 contacts (-55.2/contact) +
2D Compatibility (PS) -29723 + (NN) -12997 + (LL) 320
1D Compatibility (HY) -4800 + (ID) 3500
Total energy: -177808.0 ( -77.17 by residue)
QMean score : 0.493
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