Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MSNRIVLEPSADHPITIEPTNRRVQVRVNGEVVADTAAALCLQEASYPAVQYIPLADVVQDRLIRTETSTYCPFKGEASYYSVTTDAGDIVDDVMWTYENPYPAVAAIAGHVACYPDKAEISIFPG
2HW4 Chain:A ((18-141))
LYFQSMDLALIPDVDIDSDGVFKYVLIRVH------SAESKEIVRGYKWAEYHADIYDKVSGDMQKQGCDCECLGGGRISHQS--QDKKIHVYGYSMAY-GPAQHAISTEKIKAKYPDY-EVTW-AN
General information:
TITO was launched using:
RESULT:
Template:
2HW4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25250 for 896 contacts (-28.2/contact) +
2D Compatibility (PS) -12186 + (NN) -3434 + (LL) 1008
1D Compatibility (HY) 800 + (ID) 1150
Total energy: -40212.0 ( -44.88 by residue)
QMean score : 0.105
(partial model without unconserved sides chains):
PDB file :
Tito_2HW4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HW4-query.scw
PDB file :
Tito_Scwrl_2HW4.pdb
: