Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKRPLRWLTEQITLAGMRPPISPQLLINRPAMQPVDLTGKRILLTGASSGIGAAATKQFGLHRAVVVAVARRKDLLDAVADRITGDGGTAMSLPCDLSDMEAIDALVEDVEKRIGGIDILINNAGRSIRRPLAE-SLERWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVAT-WGVLSEASPLFSVYNASKAALSAVSRIIETEWGSQGVHSTTLYYPLVATPMIAPTKAYDGLPALTAAEAAEWMVTAARTRPVRIAPRVAVAVNALDSIGPRWVNALMQRRNEQLNP |
| 3RRO Chain:B ((6-200)) | ---------------------------------QFMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYL-GDNGKGMAL--NVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMET---NLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQ--ANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDM---TKALN--------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RRO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -93228 for 1543 contacts (-60.4/contact) +
2D Compatibility (PS) -20846 + (NN) -9426 + (LL) 8360
1D Compatibility (HY) -12400 + (ID) 3300
Total energy: -130840.0 ( -84.80 by residue)
QMean score : 0.537
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