Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRTPATVVAGVDLGDAVFAAAVRAGVARVEQLMDTELRQADEVMSDSLLHLFNAGGKRFRPLFTVLSAQIGPQPDAAAVTVAGAVIEMIHLATLYHDDV--MDEAQVRRGAPSANAQWGNNVAILAGDYLLATASRLVARLGPEA---VRI-IADTFAQ------LVTGQMRETRG-TSENVDSIEQYLKVVQEKTGSLIGAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKLPGTDVREGVHTLPMLYALRESGPDCARLRALLNGPVDDDAEVREALTLLRASPGMARAKDVLAQYAAQARHELALLPDVPGRRALAALVDYTVSRHG |
4LLS Chain:B ((59-279)) | ----------------------------------------------------TSGGKRLRGFLVLETARLHDIAAGEAIWSATA-IEALHAYSLVHDDLPCMDNDDMRRGQPTVHKKWDDATAVLAGDALQTLAFELVTHPGASASAEVRADLALSLARASGAQGMVLGQALDIAAETARAPLSLDEITRLQQGKTGALIGWSAQAGARLAQADTAALKRYAQ---ALGLAFQIADDILDVTGDSAQVGKAVGKDASAGKATFVSLL-----GLDAARARAM------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LLS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -36875 for 1626 contacts (-22.7/contact) +
2D Compatibility (PS) -22283 + (NN) -12061 + (LL) 10200
1D Compatibility (HY) -8000 + (ID) 3850
Total energy: -72869.0 ( -44.81 by residue)
QMean score : 0.314
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