Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRPLARLRGRRVVPQRSAGELDAMAAAGAVVAAALRAIRAAAAPGTSSLSLDEIA-ESVIRESGATPSFLGYHGYPASICASINDRVVHGIPSTAEVLAPGDLVSIDCGAVLDGWHGDAAITFGVGALSDADEALSEATRESLQAGIAAMVVGNRLTDVAHAIETGTRAAELRYGRSFGIVAGYGGHGIGRQMHMDPFLPNEGAPGRGPLLAAGSVLAIEPMLTLGTTKTVVLDDKWTVTTADGSRAAHWEHTVAVTDDGPRILTLG
3MAT Chain:A ((6-250))---------------KTPEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRICNDYIVNEQHAVSACLGYHGYPKSVCISINEVVCHGIPDDAKLLKDGDIVNIDVTVIKDGFHGDTSKMFIVGKPTIMGERLCRITQESLYLALRMVKPGINLREIGAAIQKFVEA------EGFSVVREYCGHGIGQGFHEEPQVLHYDSRETNVVLKPGMTFTIEPMVNAGKKEIRTMKDGWTVKTKDRSLSAQYEHTIVVTDNGCEILTL-


General information:
TITO was launched using:
RESULT:

Template: 3MAT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -117676 for 2106 contacts (-55.9/contact) +
2D Compatibility (PS) -26720 + (NN) -10519 + (LL) 1528
1D Compatibility (HY) -18000 + (ID) 4650
Total energy: -176037.0 ( -83.59 by residue)
QMean score : 0.496

(partial model without unconserved sides chains):
PDB file : Tito_3MAT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3MAT-query.scw
PDB file : Tito_Scwrl_3MAT.pdb: