Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSRRRAIQPSPALRIGPIELASPVVLAP-MAGVTNVAFRALCRQLEQSKVGTVSGLYVCE-MVTARALIER-HPVTMHMTTFSADESPRSLQLYTVDPDTTYAAARMIAGEGLADHIDMNFGCPVPKVTKRGGGAALPFKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDAHHTHLDAGRIAEAEGAAAVALHARTAAQRYSGTADWEQIARLKQHVRTIPVLGNGDIYDAGDALAMMSTTGCDGVVIGRGCLGRPWLFAELSAAFTGSPAPTPPTLGEVADIIRRHGTLLAAHFGEDKGMRDI-RKHIAWYLHGFPAGSALRRAL-AM--VKTFDE-LDCLLDRLDGTVPFPDSATGARGRQGSPARVALPDGWLTDPDDCRVPEGADAMGSGG |
| 1VHN Chain:A ((5-309)) | ---------------------VKVGLAPMA-GYTDSAFRTLAFEWG-------ADFAFSEMVSAKGFL---MNSQKTEELLPQPHERNVAVQIFGSEPNELSEAARILSEK--YKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKSV---SGKFSVKTRLGWEK--NEVEEIYRILVEEGVDEVFIHTRTVVQSFTGRAEWKALSVLEK---RIPTFVSGDIFTPEDAKRALEESGCDGLLVARGAIGRPWIFKQIKDFLRSGKYS-EPSREEILRTFERHLELLIKTKGERKAVV-EMRKFLAGYTKDLKGARRFREKVMKIEEVQILKEMFYNFIKEVE------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VHN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -210468 for 2528 contacts (-83.3/contact) +
2D Compatibility (PS) -32570 + (NN) -14369 + (LL) 3236
1D Compatibility (HY) -14400 + (ID) 4350
Total energy: -272921.0 ( -107.96 by residue)
QMean score : 0.542
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