Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MADQLTPHLEIPTAIKPRDGRFGSGPSKVRLEQLQTLTTTAAALFGTSHRQAPVKNLVGRVRSGLAELFSLPDGYEVILGNGGATAFWDAAAFGLID----KRSLHLTYGEFSAKFASAVSKNPFVGEPIIITS--DPGSAPEPQT---DPSVDVIAWAHNETSTGVAVAVRRPEGSDDALVVIDATSGAGGLPVDIAETDAYYFAPQKNFASDGGLWLAIMSPAALSRIEAIAATGRWVPDFLSLPIAVENSLKNQTYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSSQRLYSWAQERPYTTPFVTDPGLRSQVVGTIDFVDD--VDA--GTVAKILRANGIVDTEPYRKLGRNQLRVAMFPAVEPDDVSALTECVDWVVERL |
| 3E77 Chain:A ((53-374)) | --------------------------------------------------SSDFAKIINNTENLVRELLAVPDNYKVIFLQGGGCGQFSAVPLNLIGLKAGRCADYVVTGAWSAKAAEEAKKFGT--INIVHPKLGSYTKIPDPSTWNLNPDASYVYYCANETVHGVEFDFIP-DV-KGAVLVCDMSSNFLSKPVDVSKFGVIFAGAQKNV-GSAGVTVVIVRDDLLGFALRE------CPSVLEYKVQA---GNSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFRIGNAKGDDALEKRFLDKALELNMLSLKGHRS--VGGIRASLYNAVTIEDVQKLAAFMKKFLEM- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3E77.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -152375 for 2628 contacts (-58.0/contact) +
2D Compatibility (PS) -33757 + (NN) -22492 + (LL) 3508
1D Compatibility (HY) -16400 + (ID) 3400
Total energy: -224916.0 ( -85.58 by residue)
QMean score : 0.490
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