Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAGVSEAERRGHRKLVRFQARRAIGPIRPTSAAWDRDFDPAGKRIAVVGTDAAAAHYISRLSESAASVTVFTQAPRRVVTGVPL-W--TTRAKRWLRR------------------------RTGAEHPAVAWATAAIDALTSSGIRTSDGVEHPVDAIIYGTGFAIADQVGD-QTLVGAGGVTIRQAWDDGMEPYLGVAVHGFPNYFFITGPDTAAQARCVVECMKLMERTASRRIEVRRSSQQVFNERAQLKPAQPHRQTGGLEAFDLSSAATEDDQTYDGAATLTLAGARFRVRVRLTGHLDPIDGNYHWQGTVFDSLPETSLTHARAATLTIGGRSAPARITEQTPWGTHSVAGVGPPPYARSGPASATT |
| 4USR Chain:A ((127-323)) | -AVISATGTWSKPFIPPYEGRELFQGAQIHSAHYRTPAPFAGKRVMVVGGGNSGAQVLAELSSVSETLWITQEPPAF-LPDEVDGRVLFERATARWKAQQEGRSIDEPAGGFGDIVMVPPVREAR--ERGVLVAERPFARFTETGVEWADGRRENLDAVIWCSGFRPALDHLRELGVVEADGKVQV---------E-DTRVVKQPNLWLVG------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4USR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -59563 for 1131 contacts (-52.7/contact) +
2D Compatibility (PS) -17948 + (NN) -5678 + (LL) 10156
1D Compatibility (HY) -6400 + (ID) 1800
Total energy: -81233.0 ( -71.82 by residue)
QMean score : 0.307
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