Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTDHVREADDANIDDLLGDLGGTARAERAKLVEWLLEQGITPDEIRATNPPLLLATRHLVGDDGTYVSAREISENYGVDLELLQRVQRAVGLARVDDPDAVVHMRADGEAAARAQRFVELGLNPDQVVLVVRVLAEGLSHAAEAMRYTALEAIMRPGATELDIAKGSQALVSQIVPLLGPMIQDMLFMQLRHMMETEAVNAGERAAGKPLPGARQVTVAFADLVGFTQLGEVVSAEELGHLAGRLAGLARDLTA-PPVWFIKTIGDAVMLVCPDPA---------PLLDTVLKLVEVVDTDN---------NFPRLRAGVASGMAVSRA--------GDWFGSPVNVASRVTGVARPGAVLVADSVREALGDAPEADGFQWSFAGPRRLRGIRGDVRLFRVRRGATRTGSGGAAQDDDLAGSSP |
| 3R5G Chain:A ((6-195)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QRKKLTVFFSDIRGFTELSEELEAEALTDLLNNYLNEMSKIALKYGGTIDKFVGDCVMVFFGDPSTQGAKKDAVAAVSMGIAMRKHMKVLRQQWRAQGITKPLEIRMGINTGYCTVGNFGADTRMDYTIIGREVNLASRLESASEAGEILISHETYSLIKDV-----IMCRDKGQIAVKGFSRPVQIYQVVDSRR------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3R5G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -140749 for 1270 contacts (-110.8/contact) +
2D Compatibility (PS) -17120 + (NN) -6700 + (LL) 15820
1D Compatibility (HY) -10800 + (ID) 1800
Total energy: -161349.0 ( -127.05 by residue)
QMean score : 0.417
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