Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------MIPTMTSAGWAPGVVQFREYQRR-------------WLRGDVLAGLTVAAYLIPQAMAYAT----VAGLPPAAGLWASIAPLAIYALLGSSRQLSIGPESATALMTAA----VLAPMAAGDLRRYAVLAATLGLLVGLICLLAGTARLGFLASLRSRPVLVGYMAGIALVMISSQLGTITGTSVEGNEFFSEVHSFATSVTRVHWPT---FVLAMSVLALLTMLTRWAPRAPG---------PIIAVLAATMLVAVMSLDAKGIAI----------VGRIPSGLPTPGVPPVSVEDLRALIIPAAGIAIVTFTDGVLTARAFAARRGQEVNANAE------------LRAVGACNIAAGLTHGFPVSSSSSRTALADVVGGRTQLYSLIAL--------------GLVVIV-----MVFASGLLAMFPIAALGALVVYAALRLIDLSEFRRLARFRRSELMLALATTAAVLGLGVFYGVLAAVALSILELLRRVAHPHDSVLGFVPGIAGMHDIDDYPQAKRVPGLVVYRYDAPLCFANAEDFRRRALTVVDQDPGQVEWFVLNAESNVEVDLTALDALDQLRTELLRRGIVFAMARVKQDLRESLRAASLLDK----IGEDHIFMTLP-------------------TAVQAFRRR------ |
| 4UIR Chain:A ((2-646)) | NPITSKFDKVLNASSEYGHVNHEPDSSKEQQRNTPQKSMPFSDQIGNYQRNKGIPVQSYDNSKIYIIGSGIAGMSAAYYFIRDGHVPAKNITFLEQLHIDGGSLDGAGNPTDGYIIRGGREMDMTYENLWDMFQDIPALEMPAPYSVLDEYRLINDNDSNYSKARLINNKGEIKDF-------SKFGLNKMDQLAIIRLLLKNKEELDDLTIE--DYFS--ESFLKSNFWTFWRTMFAFENWHSLLELKLYMHRFLHAIDGLNDLSSLVFPKYNQYDTFVTPLRKFLQEKGVNIHLNTLVKDLDIHINTEGKVVEGI--ITEQDGKEVKIPVGKNDYVIVTTGSMTEDTFYGNNKTAPIIGIDNSTSGQSAGWKLWKNLAAKSEIFGKPEKFCSNIEKSAWESATLTCKPSALIDKLKEYSVNDPYSGKTVTGGIITITDSNWLMSFTCNRQPHFPEQPDDVLVLWVYALFMDKEGNYIKKTMLECTGDEILAELCYHLG--------------IEDQLENVQKNTIVRTAFMPYITSMF-------MPRAKG------DRPRVVPE----GCKNLGLVGQFVETNNDVVFTMESSVRTARIAVYKLLNLNKQ------VPDINPLQYDIRHLLKAAKTLNDDKPFVGEGLLRKVLKGTYFEHVLPAGEEHESFIAEHVNKFREWVKGIRG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UIR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -332605 for 4094 contacts (-81.2/contact) +
2D Compatibility (PS) -53819 + (NN) -10269 + (LL) 3460
1D Compatibility (HY) -8000 + (ID) 5350
Total energy: -406583.0 ( -99.31 by residue)
QMean score : 0.163
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