Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKAIFITGAGSGMGREGATLFHANGWRVGAIDRNEDGLAALRVQLGAERLWA--RAVDVTDKAALEGALADFCAGNVGGGLDMMWNNAGIGEGGWFEDVPYEAAVRVVDVNFKAVLTGAYAALPYLKKAPGSL------MFSTSSSSGTYGMPRIAVYSATKHAVKGLTEALSVEWQRHGVRVADVLPGLIDTAILTSTRQHSDEGPYTISAEQ----IRAAAPKKGMFRLMPSSSVAEAAWRAYQHPTRLHWYVPRSIRWIDRLKGVSPEFVRRHIAKSLATLEPKRK |
4DC1 Chain:B ((30-254)) | ----LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERY--GPVDVLVNNAGRPGGGATAELADELWLDVVETN----LTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHFSD-IWEVSTEEAFDRITARVP---IGRYVQPSEVAE-------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DC1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -69252 for 1698 contacts (-40.8/contact) +
2D Compatibility (PS) -22788 + (NN) -10944 + (LL) 5080
1D Compatibility (HY) -14000 + (ID) 3800
Total energy: -115704.0 ( -68.14 by residue)
QMean score : 0.312
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