Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLSLTLSEASCIASASRWRHIIPAGVVCALIAGIGVGCHGGPSDVVGRAGPDRAHTSITLVAYAV--PEPGWSAVIPAFNASEQGRGVQVITSYGA---SADQSRGVADGKPADLVNFSVEPDIARLVKAGKVDK--DW---DAD-------------ATKGIPFG-SVVTFVVRAGNPK-NIRDWDDLLRPGIEVITPSPLSSGSAKWNLLAPYAAKSD---GG--------RN---NQAGIDFVNTLVNEHVKLR--PGSGREATDVFVQGSGDVLISYENEAIATERAGKPVQHV-TPPQ---T----FKIENPLAVVATSTHLGAATAFRNFQYTVQAQKLWAQ-AGFRPVDPAVAADFADLFPVPAKLWTIADLGGWGSVDPQLFDKATGSITKIYLRATG |
| 1URS Chain:A ((30-333)) | -------------------------------------------------------QTITVWSWQTGPELQDVKQIAAQWAKAH-GDKVIVVDQSSNPKGFQFYATAARTGKGPDVVFGMPHDNNGVFAEEGLMAPVPSGVLNTGLYAPNTIDAIKVNGTMYSVPVSVQVAAIYYNKKLVPQPPQTWAEFVKDANAHGFMYDQANLYFDYAIIGGYGGYVFKDNNGTLDPNNIGLDTPGAVQAYTLMRDM-VSKYHWMTPSTNGSIAKAEFLAGKIGMYVSGPWDTADIEKAKIDFGVTPWPTLPNGKHATPFLGVITAFVNKESKTQAADWSLVQALTSAQAQQMYFRDSQQIPALLSVQR--------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1URS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -44551 for 1967 contacts (-22.6/contact) +
2D Compatibility (PS) -28018 + (NN) -14669 + (LL) 5552
1D Compatibility (HY) -6800 + (ID) 1600
Total energy: -90086.0 ( -45.80 by residue)
QMean score : 0.439
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