Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGGTFDPIHYGHLVAASEVADLFDLDEVVFVPSGQPWQK-GRQVSAAEHRYLMTVIATASNPRFSVSRVDIDRGGPTYTKDTLADLHALHPDSELYFTTGADALASIMSWQGWEELFELARFVGVSRPGYELRNEHITSLLGQLAKDALTLVEIPALAISSTDCRQRAEQSRPLWYLMPDGVVQYVSKCRLYCGACDAGARSTTSLAAGNGL
2QTR Chain:B ((7-187))
IGGTFDPPHYGHLLIANEVYHALNLEEVWFLPNQIPPHKQGRNITSVESRLQMLELATEAEEHFSICLEELSRKGPSYTYDTMLQLTKKYPDVQFHFIIGGDMVEYLPKWYNIEALLDLVTFVGVARPGYKLRTPY-----------PITTVEIPEFAVSSSLLRERYKEKKTCKYLLPEKVQVYIERNGLY--------------------
General information:
TITO was launched using:
RESULT:
Template:
2QTR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -121147 for 1390 contacts (-87.2/contact) +
2D Compatibility (PS) -19722 + (NN) -10054 + (LL) 1324
1D Compatibility (HY) -15200 + (ID) 3700
Total energy: -168499.0 ( -121.22 by residue)
QMean score : 0.441
(partial model without unconserved sides chains):
PDB file :
Tito_2QTR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QTR-query.scw
PDB file :
Tito_Scwrl_2QTR.pdb
: