Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSTRRDLPQSPYLAAVTGRKPSRVPVWFMRQAGRSLPEYRA-LRERYSMLAACFEPDVACEITLQPIRRYDVDAAILFSDIVVPLRAAGVDLDIVADVGPVIADPVRTAADVAAMKPLDPQ-AIQPVLVAASLLVAELG-DVPLIGFAGAPFTLASYLVEGGPSRHH--A---HVKA-MMLAEPASWHALMAKLTDLTIAFLVGQIDAGVDAIQVFDSWAGALSPIDYRQYVLPHSARVFAALGEH----GVPMTHFGVGTAELLGAMSEAVTAGERPGRGAVVGVDWRTPLTDAAARVVPGTALQGNLDPAVVLAGWPAVERAARAVVDDGRRAVDA---GAAGHIFNLGHGVLPESDPAVLADLVSLVHSL |
| 4ZR8 Chain:A ((11-359)) | -----TLKNDRFLRALLREPVDTTPIWMMRQAGRYLPEYRETRSKAG--LSLCKNTEFACEVTLQPLRRYDLDAAILFSDILTIPDALGLGLYFETGEGPKFHKTVRTEQDVANLPKLNAKADLDYVMNAVSTIRSALGGQVPLIGFSGSPWTLATYMVE------GGSSKEFRFTKQMMYAQPEVLHALLDHLADSVIDYLNAQIDAGAQAIQIFDSWGGALAHREYVEFSLNYMKKIIAGLQREKDGRRIPVIVFTKGGGQWLEPMITTG--------ADALGLDWTTPLNTARTTVAGRVALQGNLDPAVLYGSAASIEKAVKAMLDDA-----YANGEKTGYVANLGHGITQWVDPAQPKIFVDTVHEY |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4ZR8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -273352 for 2925 contacts (-93.5/contact) +
2D Compatibility (PS) -35015 + (NN) -14112 + (LL) 720
1D Compatibility (HY) -27200 + (ID) 6950
Total energy: -355909.0 ( -121.68 by residue)
QMean score : 0.528
|
|
|