Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTTLAIVRLDPGLPLPSRAHDGDAGVDLYSAEDVELAPGRRALVRTGVAVAVPFGMVGLVHPRSGLATRVGLSIVNSPGTIDAGYRGEIKVALINLDPAAPIVVHRGDRIAQLLVQRVELVELVEVSSFDEAGLASTSRGDGGHGSSGGHASL
1Q5H Chain:C ((9-142))
----LRFARLSEHATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSGCYGRVAPRSGLAAKHFIDV--GAGVIDEDYRGNVGVVLFNFGK-EKFEVKKGDRIAQLICERIFYPEIEEVQALDD-----TERGSGGFG--------
General information:
TITO was launched using:
RESULT:
Template:
1Q5H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -82938 for 854 contacts (-97.1/contact) +
2D Compatibility (PS) -15109 + (NN) -10861 + (LL) 740
1D Compatibility (HY) -11200 + (ID) 2800
Total energy: -122168.0 ( -143.05 by residue)
QMean score : 0.502
(partial model without unconserved sides chains):
PDB file :
Tito_1Q5H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Q5H-query.scw
PDB file :
Tito_Scwrl_1Q5H.pdb
: