Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATPITQLASINVPEARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHKGEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEGELLEV
1EK8 Chain:A ((1-185))
MISDIRKDAEVRMDKCVEAFKTQISKIRTGRASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLKINVFDRSMSPAVEKAIMASDLGLNPNSAGSDIRVPLPPLTEERRKDLTKIVRGEAEQARVAVRNVRRDANDKVKALLKDKEISEDDDRRSQDDVQKLTDAAIKKIEAALADKEAELMQF
General information:
TITO was launched using:
RESULT:
Template:
1EK8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54967 for 1266 contacts (-43.4/contact) +
2D Compatibility (PS) -20406 + (NN) -11555 + (LL) 0
1D Compatibility (HY) -11200 + (ID) 3700
Total energy: -101828.0 ( -80.43 by residue)
QMean score : 0.656
(partial model without unconserved sides chains):
PDB file :
Tito_1EK8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EK8-query.scw
PDB file :
Tito_Scwrl_1EK8.pdb
: