Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRARPLTLLTALAAVTLVVVAGCEARVEAEAYSAADRISSRPQARPQPQPVELLLRAITPPRAPAASPNVGFGELPTRVRQATDEAAAMGATLSVAVLDRATGQLVSNGNTQIIATASVAKLFIADDLLLAEAEGKVTLSP------------------------EDHHALDVMLQSSDDGAAERFWSQDGGNAVVTQVARRYGLRSTAPPS--------DGRWWNTISSAPDLIRYYDMLLDGSGGLPLDRAAVIIADLAQSTPTGIDGYPQRFGIPDGLY-AEPVAVKQGWM-CCIGSSWMHLSTGVI-GPE-RRYIMVIESLQPADDATARATITQAVRTMFPNGRI |
| 3QHY Chain:A ((29-268)) | --------------------------------------------------------------------------THKEFSQLEKK---FDARLGVYAIDTGTNQTIAYRPNERFAFASTYKALAAGVLLQQNST--KKLDEVITYTKEDLVDYSPVTEKHVDTGMTLGEIAEAAVRYSDNTAGNILFHKIGGPKGYEKALRQMGDRVTMSDRFETELNEAIPGDIRDTSTAKAIATNLKAFTAGN-ALPNHKRNILTKWMKGN------ATG-DKLIRAGVPTNWVVADKSGAGSYG-----TRNDIAIVWPPNRAPIIIAILSSKD----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QHY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -99013 for 1657 contacts (-59.8/contact) +
2D Compatibility (PS) -21984 + (NN) -11449 + (LL) 7720
1D Compatibility (HY) 0 + (ID) 1950
Total energy: -126676.0 ( -76.45 by residue)
QMean score : 0.501
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