Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTTQATPLTPVISRHWDDPESWTLATYQRHDRYRGYQALQKALTMPPDDVISIVKDSGLRGRGGAGFATGTKWSFIPQGDTGAAAKPHYLVVNADESEPGTCKDIPLMLATPHVLIEGVIIAAYAIRAHHAFVYVRGEVVPVLRRLHNAVAEAYAAGFLGRNIGGSGFDLELVVHAGAGAYICGEETALLDSLEGRRGQPRL-RPPFPAVAGLYGCPTVINNVETIASVP---SIILGGIDWFRSMGSEKSPGFTLYSLSGHVTRPGQY---EAPLGITLRELLDYAGGVRAGHRLKFWTPGGSSTPLLTDEHLDVP---------LDYEGVGAAGSML-GTKALEIFDE----TTCVVRAVRRWTEFYKHESCGKCTPCREGTFWLDKIYERLETGRGSHEDIDKLLDISDSILGKSFCALG-DGAASPVMSSIKHFRDEYL----AHVEGGGCPFDPRDSMLVANGVDA |
| 4XGC Chain:D ((5-457)) | -DRELVSIRRFLKERLQRDYT-TLRGY-AKERSNVRLLLQRTAEMGESNSLLLL---GPRGSGKTTLINSVLADLLPNKSFGENTLIVHLDGNLHTDDRVALKSITVQMQLENAA-DGKVFGSFAENLAFLLQCLKSKSVIFILEEFDLFCAHHNQTLLYNLFDVSQSAQAPICVLGVTC-----RLDVIELLE-KRVKSRFSHRQVFLFPSLRRFEDYVDLCRDLLSLPTGNSLLLAAEKIYNLQNIQSGA---LYFSRNHF-DPGEYGFSPRLRDAWNKQICKVLATQQARSTLQALHDFDISEAYLKNFLFRLVAHLRPQSPHITAEKMAAVGSQFEGDDKIELLCGLSVLELCLIIAIKHHSQIYDRDS-----------FNFEIIYARFSKFAKVSTTMQ---AVERSIVLKAFEHLRIAELIMPLTKVQKEFEMHKLALTYSQIHHCMQRYQALPTEVAQWAQSS |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4XGC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -113562 for 3118 contacts (-36.4/contact) +
2D Compatibility (PS) -42371 + (NN) 4315 + (LL) 1296
1D Compatibility (HY) -20800 + (ID) 3250
Total energy: -174372.0 ( -55.92 by residue)
QMean score : 0.166
|
|
|