Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSICDPALRNALRTLKLSGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTRRLRRAKFEAQATFEDFDFTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQALVHAVARR-------GGDV------------RFAK-----------------------TSRMLSDLAG----------------------GHADRSWGQRI----REYTKPLVLILDDFAMREHTAMHADDLYELISDRAITGKPLILTSNRAPNNWYGLFPNPVVAESLLDRLINTSHQILMDGPSYRPRKRPGRTTS |
| 3B60 Chain:A ((292-539)) | --------------IALMRPLKSLTNVNAQF-QRGMAACQTLFAILDSEQEKDEGKR-----VIDRATGDLEFRNVTFTYPGRE-VPALRNIN-LK-IPAGKTVALVGRSGSGKSTIASLITRFYDIDEGHILMDGHDLREYTLASLRNQVALVSQNVHLFNDTVANNIAYARTEEYSREQIEEAARMAYAMDFINKMDNGLDTIIGENGVLLSGGQRQRIAIARALLRDSPILILDEA-TSALDTESERAIQAALDELQKNRT-SLVIAHRL---------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3B60.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -44001 for 1042 contacts (-42.2/contact) +
2D Compatibility (PS) -19044 + (NN) -5460 + (LL) 3448
1D Compatibility (HY) -4400 + (ID) 1700
Total energy: -71157.0 ( -68.29 by residue)
QMean score : 0.229
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