Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAYDVARVRGLHPSLGDGWVHFDAPAGMLIPDSVATTVSTAFRRSGASTVGAHPSARRSAAVLDAAREAVADLVNAD----PGGVVLGADRAVLLSLLAEASSSRAGLGYEVIVSRLDDEANIAPWLRAAHRYGAKVKWAEVDIETGELPTWQWESLIS---KSTRLVAVNSASGTLGGVTDLRAMTKLVHDVGALVVVDHSAAAPYRLLDIRETDADVVTVNAHAWGG-PPIGAMVFRDPSVMNSFGSVSTNPYATGPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRERLAVSMQSADAYLNRVFDYLMVSLRSLPLVMLIGRPEAQ-IPVVSFAVHKVPADRVVQRLADNGILAIANTGSRV---LDVLGVN--DVGGAVTVGLAHYSTMAEVDQLVRALASLG |
| 4IXO Chain:A ((8-374)) | -----------------HMIYLDHNATTFIDPRVKEFIISLMDKE-LNPSSAHSSGRFAKNLIETVRAQIATALGITLSSREYDITFTSSGTEGNNLIMKNFY----DG-DIFISAIEHLSIYNHINY-----APNIKVISVNT-QGLVDLEHLEELLAQSNTSKKLVSIIMANNESGVLQDIAEIGKITKKYEAKFHSDLVQGFGRIPINIKALGLDFATISGHKIGGGQGGAALISSSN-F--QITPMIIGGG--QEKSVRSGTENVLAIAGFGLASALRT---------------DNISENYIKIKKLQENLEKKLKKYPNVNIVSNNVARLPNTTLITIPNTDAQAKLIGFDLHNICVSSG-----SHVLTNMGVGEEEAKSSIRISLSHTNTVRDIEAFIEAFEEI- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IXO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -265874 for 2992 contacts (-88.9/contact) +
2D Compatibility (PS) -37916 + (NN) -24300 + (LL) 2852
1D Compatibility (HY) -14000 + (ID) 2550
Total energy: -341788.0 ( -114.23 by residue)
QMean score : 0.500
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