Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMIEGLEKMLAKGVDNALLRFGLGKGYLDAGDAERAAEHLQRCVEQDPKYSAGWKLLGKARQAAGDLAGARQAWEQGLATAATHGDKQAEKEMTVFLRKLDRART
2KAT Chain:A ((3-86))
AITERLEAMLAQGTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQAWESGLAAAQSRGDQQVVKELQVFLRRLAREDA
General information:
TITO was launched using:
RESULT:
Template:
2KAT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20917 for 565 contacts (-37.0/contact) +
2D Compatibility (PS) -9711 + (NN) -9079 + (LL) 0
1D Compatibility (HY) -4400 + (ID) 2200
Total energy: -46307.0 ( -81.96 by residue)
QMean score : 0.761
(partial model without unconserved sides chains):
PDB file :
Tito_2KAT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KAT-query.scw
PDB file :
Tito_Scwrl_2KAT.pdb
: