Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSHSAKKALLPLLAVATLAGLAGCATETSTALPVQQVESVNRPYSGVRSPIAVGKFDNRSSYMRGIFSDGVDRLGGQAKTILITHLQQTNRFNVLDRDNMSEIQQEAAIKGQAQRLKGADYVVTGDVTEFGRKEV----GDRQLFGILGRGKSQIAYAKVALNIVNISTSEVVYSTQGAGEYALSNREVIGFGGTASYDSTLNGKVLDLAMREAVNKLVNAVDSGAWKPQNQ |
3ZBD Chain:A ((-4-105)) | ------------------------------------------------------------------------HMSSKQFKILVNEDYQVNVPSLPIRDVLQEIKYCYRNG-----FEGYVFVP-----EYCRDLVDCDRKDHYVIGVLGNGVSDLKPVLLTEPSVMLQGFIVRANCNGVLEDFDLKIA-------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZBD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 12895 for 691 contacts (18.7/contact) +
2D Compatibility (PS) -10926 + (NN) -1539 + (LL) 6904
1D Compatibility (HY) 400 + (ID) 500
Total energy: 7234.0 ( 10.47 by residue)
QMean score : 0.157
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