Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSRHGLLRSLFAAAALLGAAGVFAASAEPLRLEVYNPGEKAIFAVSSELLVGQ--REAMLIDAQFSRADAEQLVKRIQASGKTLSTIYISHGDPDFYFGLDVLKAAFPEAKILATAQTVAHIQATKDAKLAYWGPILKDNAPTSLVVPEPLKGDQLKLEGHALKVVDLKGPSPDRTVLWIPSLKTVVGGVLVESGSHVWTADTQTQASRQAWVAMLDRIEALQPR-RVVPGHFTGEEPKG-LDGVRFTRDYLKALEAELPKARDSAALVEAMKRRYPNLPGEEGLELSAKVLKGEMQWP |
| 1XM8 Chain:A ((10-196)) | ------------------------------------------KDNYAYILHDEDTGTVGVVDPSEA----EPIIDSLKRSGRNLTYILNTHHHYDHTGGNLELKDRY-GAKVIGSAMDKDRIPGI---------------------DMALKDGDKWMFAGHEVHVMDTPGHTKGHISLYFPGSRAIFTGDTMFSLSCGKL----FEGTPKQMLASLQKITSLPDDTSIYCGHEYTLSNSKFALSLEPNNEVLQSYAAHVAELRSKKLPTIPTTVKMEKACNPFLRSSNTDIRRALRIPE |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1XM8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -70156 for 1473 contacts (-47.6/contact) +
2D Compatibility (PS) -19538 + (NN) -3264 + (LL) 4960
1D Compatibility (HY) -5200 + (ID) 1800
Total energy: -94998.0 ( -64.49 by residue)
QMean score : 0.441
|
|
|