Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNDLTLHYLYDPLCGWCYGASPLLAAACEVTGLDVRLHGG-GMMTDANRQPVGAGLRHYVMPHDLRIAQLTGQPFGKDYFDGLLRDTSAVFDSAPPTAAVLAAEALDGLGAAMLARIQRAHYVEGRRIAERPVLLELGAELGLGEGFAEAFDACSGEPLRAHFADSRRLMNRLGAAGFPTFALERDGRLQVLDTGRYLGQPDDWRAFLETQLRLAGGSGAVGGAAAPLCRIDGCA
3KZQ Chain:A ((1-206))
-MNIKLYYVHDPMCSWCWGYKPTIEKLKQQLPGVIQFEYVVGGLAPDTNLPMPPEMQQKLEGIWKQIETQLGTKFNYD----FWKLCTPVRSTYQSCRAVIAAGF-QDSYEQMLEAIQHAYYLRAMPPHEEATHLQLAKEIGLNVQQFKNDM--DGTLLEGVFQDQLSLAKSLGVNSYPSLVLQINDAYFPIEVDY--LSTEPTLKLIRERIIENM-------------------
General information:
TITO was launched using:
RESULT:
Template:
3KZQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -89046 for 1556 contacts (-57.2/contact) +
2D Compatibility (PS) -22481 + (NN) -11667 + (LL) 1228
1D Compatibility (HY) -9200 + (ID) 2050
Total energy: -133216.0 ( -85.61 by residue)
QMean score : 0.319
(partial model without unconserved sides chains):
PDB file :
Tito_3KZQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KZQ-query.scw
PDB file :
Tito_Scwrl_3KZQ.pdb
: