Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSQALSIVASGMVSAVGL-SAPASCAAIRCALDNFQETRFIDQGGEWLLAASVPLEQPWRGRAKLLKMAARAIDEALRGQPDLDCTELPLLLCVAEGDRPGRCAGLDESFLRDLEGELGRRFHP-SSALIARGRVGGAVALLNARKLI-QGGCRQVLVAGVDSFVSGPTLAAYEARERLLTSQNSNGFIPGEGAAAVLVAAPLH-EE-APQLL-------------CIGLGFGVE------KA-TVESE-DLPLRADGLSQAVRAALAEAGCGLEQMDYRLTDISGEQYYFKEASLTLSRNLRVLKPKFDLWHPADCIGECGAAIGPALLAVALAASRKGYGDGPNVFCHLGNDAGERAAALLSYRRVRAA |
| 2X3E Chain:A ((3-326)) | --RAAVVCGLGSYLPEAVLSNDMLAAELDTSDAWI-----SS-------RTGVRQR-HIAGDLGSGDLALRAASAALASAGL--ERVDAVVLATSTGD------FCCPATAPRVAARLGLV--GALAFDLSAAATGFVYGLASVGSLISAGLADSALLVGVDTFSHTLDP-----------ADRSTRALFGDGAGAVVLRAGDAEEEGALLAFDLGSDGHQFDLLMTPAVSRAERSSGQASNYFRMDGKAVFGQAVTQMSDSVRRVLDRVGWQASDLHHLVPHQANTRILAAVA----DQ-LDLP--VERVVSNIAEVGNTVAASIPLALAHGLRQGI--LRDGGNMVLTGFGAGLTWGSVALRWPKIVP- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2X3E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -165258 for 2806 contacts (-58.9/contact) +
2D Compatibility (PS) -31644 + (NN) -9997 + (LL) 3152
1D Compatibility (HY) -4000 + (ID) 2700
Total energy: -210447.0 ( -75.00 by residue)
QMean score : 0.361
|
|
|