Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPDRMRGVKSDSPEQESADDALKRIVDGFQHFRREVFPEQQALFKKLANSQRPRAMFITCADSRIVPELITQSSPGDLFVTRNVGNVVPPYGQMNGGVSTAIEYAVLALGVHHIIVCGHSDCGAMRAVLDPQTLERMPTVKAWLRHAEVARTVVADNCDCGASHDTL----------GVLTEENVVAQLDHLRTHPSVASRLASGQ-LFIHGWVYDIESAQIRAYDAKQGRFLPLDGEHPVPMATPAPRYLSS
3E3G Chain:F ((2-183))
-------------------DKIKQLFANNYSWAQRM-------------HQTPHYLWIACSDSRVPAEKLTNLEPGELFVHRNVANQVI---HTDFNCLSVVQYAVDVLKIEHIIICGHTNCGGIHAAMADKDL---GLINNWLLHIR----------DIWFKHGHLLGKLSPEKRADMLTKINVAEQVYNLGRTSIVKSAWERGQKLSLHGWVYDVNDGFLVDQGVMATSRETLEISYRNAIARLSILDEEN
General information:
TITO was launched using:
RESULT:
Template:
3E3G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -107509 for 1136 contacts (-94.6/contact) +
2D Compatibility (PS) -17067 + (NN) -10425 + (LL) 2844
1D Compatibility (HY) -15600 + (ID) 2900
Total energy: -150657.0 ( -132.62 by residue)
QMean score : 0.512
(partial model without unconserved sides chains):
PDB file :
Tito_3E3G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3E3G-query.scw
PDB file :
Tito_Scwrl_3E3G.pdb
: