Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------------------------------------------------------------MSDPKTLTPEQRIKELEQQLELMSQKDQFFETVVDVLKNDYGVSVVKKRSGKSSRKVKSQD----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 4UM2 Chain:A ((1-582)) | SMELHRLLRVADNQELQLSNLLSRDRISPEGLEKMAQLRAELLQLYERCILLDIEFSDNQNVDQILWKNAFYQVIEKFRQLVKDPNVENPEQIRNRL---LELLDEGSDFFDSLLQKLQVTYKFKLEDYMDGLAIRLRKTVKYALISAQRCMICQGDIARYREQASDTANYGKARSWYLKAQHIAPKNGRPYNQLALLAVYTRRKLDAVYYYMRSLAASNPILTAKESLMSLFEETKRKAEQMEKGLGSLSPSDLNKRFILSFLHAHGKLFTRIGMETFPAVAEKVLKEFQVLLQHSPSPIGSTRMLQLMTINMFAVHNSQRSVIQEQAAALGLAMFSLLVRRCTCLLKESLSSPEDQDDQDDIKVSSFVPDLKELLPSVKVWSDWMLGYPDTWNPPPTSLDLPSHVAVDVWSTLADFCNILTAVNQSEVPLYKDPDDDLTLLILEEDRLLSGFVPLLAAPQDPCYVEKTSDKVIAADCKRVTVLKYFLEALCGQEEPLLAFKGGKYVSVAPV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UM2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 7518 for 238 contacts (31.6/contact) +
2D Compatibility (PS) -6285 + (NN) -2201 + (LL) 344
1D Compatibility (HY) -3200 + (ID) 800
Total energy: -4624.0 ( -19.43 by residue)
QMean score : ?
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