Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDCLFCKIVAGEVPARKFYEDEEVVAFHDIGPQAPVHFLVIPKRHIPTLEHLTEADRPLAGHILFTAQRLAREQG-CEEGFRVVMNCNDLGGQTVHHIHMHVLGQRQMHWPPG
3N1S Chain:F ((4-108))
-ETIFSKIIRREI-SDIVYQDDLVTAFRDISPQAPTHILIIPNILIPTVNDVSAEHEQALGRMITVAAKIAEQEGIAEDGYRLIMNTNRHGGQEVYHIHMHLLGGRPLGPMLA
General information:
TITO was launched using:
RESULT:
Template:
3N1S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -84210 for 719 contacts (-117.1/contact) +
2D Compatibility (PS) -11375 + (NN) -7765 + (LL) 68
1D Compatibility (HY) -8000 + (ID) 2200
Total energy: -113482.0 ( -157.83 by residue)
QMean score : 0.541
(partial model without unconserved sides chains):
PDB file :
Tito_3N1S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3N1S-query.scw
PDB file :
Tito_Scwrl_3N1S.pdb
: