Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MQRIRIIDSHT----GGEPTRLVIGGFPDLGQGDMAERRRLLGERHDAWRAACILEPRGSDVLVGALLCAPVDPEACAGVIFFNNSGYLGMCGHGTIGLVASLAHLGRI-GPGVHRIETPVGEVEATLHEDGSVSVRNVPAYRYRRQVSVEVPGIGRVSGD--------IAWGGNWFFLVAGHGQRLAGDNLDALTAYTVAVQQALDDQDIRGEDGGAIDHIELFADDPHADSRNFVLCPGKAYDRSPCGTGTSAKLACLAADGKLLPGQPWRQASVIGSQFEGRYEW---LDGQPGGPIVPTIRGRAHVSAEATLLLADDDPFAWGIRR |
| 1YM5 Chain:A ((2-295)) | TLMVPFKQVDVFTEKPFMGNPVAVINFLEIDENEVSQEELQAIANWTNLSE---------------TTFLFKPSDKKYDYKLRIFTPRSELPFAGHPTIGSCKAFLEFTKNTTATSLVQECKIGAVPITIN-EGLISFK-APMADYESISSEMIADYEKAIGLKFIKPPALLHTGPEWIVALVEDAETCFNANPN---------FAMLAHQTKQNDHVGIILAGPKKEAAIKNSYEMRAFAPVINVYEDPV-CGSGSVALARYLQEVYKFEKTTDITISEGGRLKRNGLMLASIKKEADNSTSYYIAGHATTVIDGKIKVH----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YM5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -122245 for 2337 contacts (-52.3/contact) +
2D Compatibility (PS) -30626 + (NN) -17497 + (LL) 2508
1D Compatibility (HY) -400 + (ID) 2050
Total energy: -170310.0 ( -72.88 by residue)
QMean score : 0.294
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