Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAFLLIGLSEHRPLPLGQGSPLRWLALLFGLLAWHAGAGERVIYPRHSEGRNPEPYVVELLQLALARSGGDYRLEPSAQPMPQSRAQLRLEQDDPGLQVMWAQSRDDLEETLLPIRIPIYRGLIGWRIPLVSAANKDILASARTLDDLRRLRFGQRQDWADTPILRANGLEVKTSQNYESLFRMLDAGRFEV-------FPREVVVID--GELEDASRAGLHLAIDQHLALHYPAAFYFFVSRQRPELAEAIRQGLEKAIADGSFERLFERHFKTRLEKLALRQRRIIELKNPYLPGKTPFQREALWYRP |
| 2YKF Chain:A ((3-288)) | MSTLGDLLAEHTVLPGSAVDHLHAVVGEWQLLADLSFADYLMWVRRDDG---------VLVCVAQCR--------PNTGPTVVHTDAVGTVVAANSMPLVAATFSGGHSVEVSPVRFG----------------DQVVAVLTRHQPELAARR-------------RSGHLETAYRLCATDLLRMLAEGTFPDASRSSPRAGDGFIRLDVDGVVSYASPNALSAYHRMGLTTELEGVNLIDATRPLIS-DPFEAHEVDEHVQDLLAGDGKGMRMEVDAGGATVLLRTLPLVVAGRNVGAAILIRDVTEVKR |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2YKF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -45410 for 2043 contacts (-22.2/contact) +
2D Compatibility (PS) -26139 + (NN) -6077 + (LL) 2468
1D Compatibility (HY) -3200 + (ID) 2200
Total energy: -80558.0 ( -39.43 by residue)
QMean score : ?
|
|
|