Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTSQINRQYQLAQRP--SGLPGRDTFSFVETPLGEPA-EGQILVKNEYLSLDPAMRGWMND--ARSYIPPVGIGEVMRALGVGKVLVSKHPGFQAGDYVNGALG-VQDYFIGEPKGFYKVDPS--RAPLPRYLSALGMTGMTAYFALLDVGQPKNG--ETVVISGAAGAVGSVAGQIARLKGC-RVVGIAGGAEKCRFLVEELGFDGAIDYKNEDLAAGLKRECPKGIDVFFDNVGGEILDTVLTRIAFKARIVLCGAISQYNNKEAVRGPANYLSLLVNRAR---MEGMVVMDYAQRFPEGLKEMATWLAEGKLQSREDIVEGLETFPETLLKLFSGENFGKLVLKV |
| 2W98 Chain:B ((9-346)) | ----------LNSRPGKNGNPVAENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVVDGGGIGIIEESKHTNLTKGDFVTSFYWPWQTKVILDGNSLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKDNVAEQLRESCPAGVDVYFDNVGGNISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRERFLVLNYKDKFEPGILQLSQWFKEGKLKIKETVINGLENMGAAFQSMMTGGNIGKQIVCI |
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General information:
TITO was launched using:
| RESULT:
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Template: 2W98.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -199927 for 2789 contacts (-71.7/contact) +
2D Compatibility (PS) -35073 + (NN) -17110 + (LL) 908
1D Compatibility (HY) -30400 + (ID) 6500
Total energy: -288102.0 ( -103.30 by residue)
QMean score : 0.469
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