Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRALLLSGCLALVLLTQQAAAQTLLVVGDSISAALGLDTSQGWVALLQKRLADEGYDYRVVNASISGDTSAGGLARLPALLAEEKPALVVIELGGNDGLRGMAPAQLQQNLASMAQKARAEGAKVLLLGIQLPPNYGPRYIEAFSRVYGAVAAQEKTALVPFFLEGVGGVQGMMQADGIHPALAAQPRLLENVWPTLKPLL
3HP4 Chain:A ((2-181))
--------------------DNTILILGD-LSAAYGLQQEEGWVKLLQDKYDAEQSDIVLINASISGETSGGALRRLDALLEQYEPTHVLIELGANDGLRGFPVKKMQTNLTALVKKSQAANAMTALMEIYIPPNYGPRYSKMFTSSFTQISEDTNAHLMNFFMLDIAGKSDLMQNDSLHPNKKAQPLIRDEMYDSIKKW-
General information:
TITO was launched using:
RESULT:
Template:
3HP4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -110983 for 1465 contacts (-75.8/contact) +
2D Compatibility (PS) -19677 + (NN) -9332 + (LL) 2604
1D Compatibility (HY) -17200 + (ID) 3700
Total energy: -158288.0 ( -108.05 by residue)
QMean score : 0.588
(partial model without unconserved sides chains):
PDB file :
Tito_3HP4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HP4-query.scw
PDB file :
Tito_Scwrl_3HP4.pdb
: