Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIIKPRVRGFICVTTHPAGCEANVKQQIDYVEAKGPVVNGPKKVLVIGSSTGYGLAARITAAFGS-GADTLGVFFERPGSESKPGTAGWYNSAAFEKFAHEKGLYARSINGDAFSDEVKRLTIETIKRDLGKVDLVVYSLAAPRRTHPKSGEVFSSTLKPIGKSVSFRGLDTDKEVIKDVVLEAASDQEVADTVAVMGGEDWQMWIDALLEADVLADGAKTTAFTYLGEKITHDIYWNGSIGAAKKDLDQKVLGIRDKLAPLGGDARVSVLKAVVTQASSAIPMMPLYLSLLFKVMKEQGTHEGCIEQVDGLYRESLYGAEPRLDEEGRLRADYKELQPEVQSRVEELWDKVTNENLYELTDFAGYKSEFLNLFGFEVAGVDYEQDVNPDVQIANLIQA |
| 3GAF Chain:A ((5-199)) | ----------------------------------SPFHLNDAVAIVTGAAAGIGRA--IAGTFAKAGASVVVTDLKSEGAEA------------VAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGKITVLVNNAGGGGPKP-------------FD-M---------------------PMSDFEWAFKLNL-FSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNV--RMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALAT---------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GAF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -58240 for 1587 contacts (-36.7/contact) +
2D Compatibility (PS) -20556 + (NN) -3093 + (LL) 13972
1D Compatibility (HY) 400 + (ID) 1500
Total energy: -69017.0 ( -43.49 by residue)
QMean score : 0.422
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